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biorxiv2026-10-03metabolismneurobiologyAlzheimerproteomics

Human Alzheimer synapses lose mitochondrial proteins by mid-Braak stage, while proteostasis and astrocytic coats keep rising

Proteomics of synaptoneurosomes from 67 middle-temporal gyri (40 Alzheimer Braak-staged, 27 controls) finds six stage-associated synaptic signatures. Mitochondrial function and synaptic signalling are already down by mid-stage. Clathrin endocytosis rises at mid-stage and plateaus. Proteostasis and perisynaptic astrocyte proteins climb the whole way. Forty-two plasma proteins map onto those signatures; PHGDH is the early-cognition and excitatory-inhibitory-imbalance pick.

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Signal profile (abstract-level)

metabolism · neurobiology · Alzheimer · proteomics

Score 86/100BIORXIVhigh confidencemetabolism
86
Importance
50
Mito signal
53
Dysfunction
83
Evidence
50
Translational

Editorial signal profile from the abstract (importance score, mito keywords, dysfunction tags, evidence density, translational cues). Not a figure reproduced from the preprint PDF.

Finding. In human Alzheimer synapses, mitochondrial proteins are already down by the middle of the Braak march, while the proteostasis and astrocyte coats are still climbing. Georgiades, Jackson and colleagues isolate synaptoneurosomes from 67 middle-temporal gyri (40 Alzheimer cases across stages, 27 controls) and pull six stage-linked proteomic signatures. Mitochondrial function and synaptic signalling fall by mid-stage. Clathrin-mediated endocytosis rises then stalls. Proteostasis and perisynaptic astrocytic proteins rise the whole way. Excitatory and inhibitory protein signals drift (P = 7.80 times 10 to the minus 3). They then take those brain signatures into two plasma proteomic sets and nominate 42 proteins. PHGDH is the one that survives early CDR 0-to-0.5, neuropathological progression, and the excitatory-inhibitory imbalance.

Why this paper matters

Synapse loss is still the best tissue correlate of Alzheimer cognition. Timing the mitochondrial drop to mid-stage, ahead of a still-rising proteostasis/astrocyte program, is a staging fact you can put next to a mouse. Plasma PHGDH is a hypothesis, not a test. The n and the Braak span are why the mitochondrial clause is believable.

What they actually measured

Human synaptoneurosome proteomics, networks, pathway/cell-type scores, plasma mapping. No synaptic respirometry.

How to read the score

Mid 80s. Human, staged, mitochondrial signature named. Confidence is high for the tissue pattern.

Caveats

Post-mortem. Protein is not flux. One gyrus. Do not sell PHGDH as a diagnostic.

What to do with it

If you stage Alzheimer synapses, put mitochondria and signalling in the mid-stage bin and proteostasis/astrocyte on the progressive axis. Pull PHGDH only as a plasma echo of that map. Pair it with this week's ARMS2 and TBI-pyruvate papers: different diseases, same instinct that carbon and organelles fail before the late anatomy.

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Source preprint

Stage-specific proteomic signatures of synaptopathy in Alzheimer’s disease

10.64898/2026.10.02.755976

Georgiades T, Griffiths J, Gibbs F, Chandra E, Papageorgopoulou M, Liang D, Whitwell HJ, Matthews PM, Barnes SJ, Grant SG, Jackson JS.

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