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← All articlesEditorial brief · abstract-levelScore 86/100Confidence high
biorxiv2026-09-07mitophagyERubiquitinautophagy

ER ligase Gp78 builds DFCP1 omegasomes and chews mitochondrial proteins there, without PINK1 or Parkin

Mitophagy is not only a Parkin coat on a damaged mitochondrion. The ER-resident E3 ligase Gp78 sits on DFCP1-positive omegasomes, needs its RING and the BAG6-UBL4A-USP13 module, and drives outer-membrane loss (TOMM20-negative intermediates) while mitochondria are still in one piece. PINK1 and Parkin are dispensable.

Mito.news · at a glance

Signal profile (abstract-level)

mitophagy · ER · ubiquitin · autophagy

Score 86/100BIORXIVhigh confidencemitophagy
86
Importance
60
Mito signal
53
Dysfunction
75
Evidence
15
Translational

Editorial signal profile from the abstract (importance score, mito keywords, dysfunction tags, evidence density, translational cues). Not a figure reproduced from the preprint PDF.

Finding. The first bite of a mitochondrion can happen on the endoplasmic reticulum. Ortiz-Silva, Nabi and colleagues put the ER E3 ligase Gp78 on DFCP1-positive omegasomes and show it is required to make those omegasomes and to degrade mitochondrial proteins there. Super-resolution STED says DFCP1 and LC3 structures hug intact mitochondrial fragments that then empty. Acute ivermectin mitophagy that strips TOMM20 needs the Gp78 RING and the BAG6-UBL4A-USP13 module. It does not need PINK1 or Parkin.

Why this paper matters

Textbook mitophagy starts with PINK1 on the outer membrane and Parkin painting ubiquitin. Plenty of tissues keep eating mitochondria without that pair. Gp78 was already on the Parkin-independent list. The missing geometry was where the ER, which births omegasomes, meets the cargo. This paper supplies the geometry.

The intact-fragment observation matters. You do not have to pulverize the organelle before the autophagosome arrives. Content loss is progressive on pieces that still look like mitochondria.

How to read the score

High eighties. Parkin-independent path, named ligase module, omegasome locale, STED. Confidence is high for the ivermectin/RING/BAG6 stack, medium for how general the trigger is.

Caveats

Ivermectin is a hammer. ERAD and mitophagy clients of Gp78 could compete. Do not declare PINK1 optional in substantia nigra from this brief.

What to do with it

If you map mitophagy, add an ER-omegasome, Gp78-positive start site. If you screen Parkin-null turnover, include BAG6-UBL4A-USP13. Pull the 3D STED object tables.

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Source preprint

The Gp78 ubiquitin E3 ligase drives mitophagy by regulating omegasome formation

10.64898/2026.09.04.749530

Ortiz-Silva M, Joshi B, Zheng J, Takimoto R, Chopra S, Yachie N, Hamarneh G, Nabi IR.

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